Publications
A robust approach to 3D neuron shape representation for quantification and classification.. BMC Bioinformatics. 24(1):366.
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2023. A single oscillating proto-hypothalamic neuron gates taxis behavior in the primitive chordate Ciona.. Curr Biol. 33(16)
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2023. A whole nervous system atlas of glutamate receptors reveals distinct receptor roles in sensorimotor circuits. bioRxiv. 2023.04.18.537384
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2023. .
2022.
Automatic Detection and Neurotransmitter Prediction of Synapses in Electron Microscopy. BioRxiv . 2021.11.02.467022
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2021. Disruption of left-right axis specification in Ciona induces molecular, cellular, and functional defects in asymmetric brain structures.. BMC Biol. 19(1):141.
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2021. Fold Change Detection in Visual Processing.. Front. Neural Circuits 15:705161.. 15
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2021. Antagonistic Inhibitory Circuits Integrate Visual and Gravitactic Behaviors.. Curr Biol. 30(4):600-609.e2.
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2020. Tunicate gastrulation.. Curr Top Dev Biol. 136:219-242.
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2019.
Cellular Processes of Notochord Formation.. Adv Exp Med Biol. 1029:165-177.
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2018. Photoreceptor specialization and the visuomotor repertoire of the primitive chordate .. J Exp Biol. 221(Pt 7)
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2018. A microRNA-mRNA expression network during oral siphon regeneration in Ciona. Development. 144(10)
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2017. ACAM, a novel member of the neural IgCAM family, mediates anterior neural tube closure in a primitive chordate.. Dev Biol. 406(1)
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2016. CellECT: cell evolution capturing tool.. BMC Bioinformatics. 17(1):88.
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2015.
T-type Calcium Channel Regulation of Neural Tube Closure and EphrinA/EPHA Expression.. Cell Rep. 13(4):829-39.
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2015. A linear program formulation for the segmentation of Ciona membrane volumes.. Med Image Comput Comput Assist Interv. 16(Pt 1):444-51.
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2013. A transiently expressed connexin is essential for anterior neural plate development in Ciona intestinalis.. Development. 140(1):147-55.
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2013. Whole-organ cell shape analysis reveals the developmental basis of ascidian notochord taper.. Dev Biol. 373(2):281-9.
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2013. AN AUTOMATIC FEATURE BASED MODEL FOR CELL SEGMENTATION FROM CONFOCAL MICROSCOPY VOLUMES.. Proc IEEE Int Symp Biomed Imaging. :199-203.
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2011. Ciona genetics.. Methods Mol Biol. 770:401-22.
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2011.